Analysis
your PCR products in only 6 minutes
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Status" to see who are using 6mgel technologies.
How to analysis your PCR products in only 6 minutes?
PCR and gel electrophoresis are two steps of PCR technique. In
a protocol of PCR gel analysis, PCR products were loaded into gel wells
Agarose has been widely used for PCR gel electrophoresis
in DNA RNA analysis procedures because agarose powder can be easily heated
to form an agarose gel with sample wells. In PCR gel electrophoresis
method, for example, a microwave of 1 minute heating can melt agarose powder
into buffer solution. The agarose gel solution is then cooled down to form an
agarose gel.
The Problem of your old PCR gel system
1x
running buffer, a
highly conductive liquid, has two functions in
conventional submarine agarose gel electrophoresis: keeping the agarose gel cooled
and conducting electric current.
To
avoid gel overheating, the volume of running buffer should be as
large as possible. But more buffer conducts more electric current, which generates more
heat. So buffer volume should be as small as
possible. Which is correct - more buffer or less buffer?
Breakthrough in rapid
electrophoresis with no running buffer
See User Feedback about the performance of buffer-less high speed electrophoresis:
" The
Liberty
bufferless gel system is the best gel electrophoresis system we've ever
used. It's not only easy to set up, robust, and fast, but generates
excellent results without the need of running buffer. Highly
recommended. See our genotyping service picture below." ---- Ivan Delgado Orlic, President and CEO,
Mouse
Genotype Co.
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The
principle of the 6Mgel invention
The
inventor of 6mgel recognized that water is the best and cheapest
coolant. The electrical resistance of lab dd-water is 18MΩ,
which means that dd-water is an excellent electrical
insulator. By simply adding dd-water directly on top of the
buffer-containing agarose gel, the desired effects are achieved:
gels
can be run much faster! You can add a large volume of
dd-water to dissipate heat so that a much higher voltage can be
applied to drive faster migration of DNA molecules. Band "smiling" is eliminated because
the large volume of dd-water in direct contact with the gel
maintains even heat distribution. Also, sharper banding occurs
due to "stacking effects of dd-water in gel wells.
In
6Mgel, the V/cm in wells is elevated about 3-fold higher than in
the gel body, which drives DNA 3 times faster in wells than in
the gel body, resulting in sharper bands. Furthermore,
consumption of running buffer can be reduced by 50-75%.
During
the development of 6Mgel, more and more features were
added, such as buffer-less high speed electrophoresis, lab-made
precast gels for high-speed electrophoresis, and agarose-saving
gel systems. Go to 6mgel systems for
more information.
Q & A:
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What kind of agarose grade is required for high speed PCR
electrophoresis: ---- In PCR electrophoresis, agarose quality is important.
But our high speed electrophoresis technique was designed for any grade of
agarose powder on the market. So far, over 86 different kinds of agarose
have been used successfully in our Liberty
120 gel system for rapid electrophoresis. |
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How electrophoretic power is connected: ---- PCR gel is
usually immersed under electrophoresis buffer for electrophoretic
connection. In our techniques, The body of PCR gel is immersed in cooling
water. Two ends of PCR gel are exposed to buffer reservoirs for
electrophoretic connection. This setup reduces temperature of PCR gel during
electrophoresis so that high voltage can be used to drive DNA samples with
rapid electrophoretic migration. |
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What kind of electrophoresis buffer used for high speed PCR
electrophoresis: ---- For PCR electrophoresis, 1X TAE buffer, 1x TBE buffer
are the most popular buffers of electrophoresis, For denaturing
electrophoresis, MOPS is the choice of buffer in high speed electrophoresis. |
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Why Liberty 120 is the best gel system for high
concentration PCR electrophoresis: ---- First, high resolution agarose is
the most expensive agarose on the market, usually over $3 for each gram of
agarose. Second, high resolution agarose is used at a very high
concentration which make an PCR gel extra costly. Third, high concentration
agarose makes electrophoretic migration of DNA very slow in conventional
electrophoresis, usually over hours. With Liberty 120 gel system, you can
save agarose with 3 gel sizes, you can run gels at much higher voltage to
generate powerful electrophoretic force. The costs of time and agarose are
reduced. |
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Why PCR gel can be immersed in cooling water: ---- Agarose
solution in TAE buffer forms a solid agarose gel when cold down in gel tray.
By soaking the PCR gel in a cooling water without running electrophoresis,
the buffer ions in PCR gel body can release slowly from PCR gel body to
cooling water. But, during high voltage PCR electrophoresis, ions are driven
by powerful electrophoretic force between two electrodes and move
horizontally across PCR gel body which prevents the escape of ions from PCR
gel to cooling water. |
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Why high speed PCR gel electrophoresis shows straight
banding: ---- The rate of electrophoretic migration of DNA through PCR gel
is depend on voltage, agarose concentration, and temperature. In regarding
to the issue of "band smiling", the concentration of agarose is
uniform and can be removed from our discussion. For factor of temperature,
in traditional PCR electrophoresis, PCR gel is immersed under a thin layer
of electrophoresis buffer (the layer of buffer has to be thin for reducing
electric current). The cooling function of the buffer liquid is very weak.
The local temperature across sample lanes of a PCR gel during
electrophoresis varies significantly which is the main source of "gel
band smiling". In Liberty 120 gel system, agarose gel is immersed under
large volume of cooling water, every points of the entire PCR gel remain in
uniform temperature during electrophoresis, this is, gel smiling is
substantially removed. |
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Can we run sybr green pcr high speed --- Yes. Sybr green
pcr samples show the same bands as regular tagman pcrs. |
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Can we see pcr primers on high speed gel --- The length of
PCR primers are usually 18-30 bases. Frequently, PCR primers form dimers in
gel electrophoresis. Therefore, when running a high concentration gel, such
as 3% high resolution agarose gel, we can see PCR primers in two bands. The
first band is primer in single formate. The second band is primer dimer. |
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What are the differences between PCR and real time QPCR ---
When compare the real time PCR with regular pcr amplification methods, the
key point are: A. The regular taqman PCR gives your the final result of the
amplification. But real time PCR shows you the speed of template detection
and amplification. That is, Real time Q PCR offers you a quantitative
measurement of your template. Higher quantity of template reaches maximum
amplification in earlier cycles and lower quantity of template reaches
maximum amplications in delayed cycles of real time pcr analysis. B. In real
time q pcr, 3 primers are required. The 3rd primer is a probe to report the
progress of the real time pcr in each thermal cycle. That is why it called
real time q PCR. While regular PCR provides no information about the thermal
cycles. |
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6Mgel
Innovative Gel Tips
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What
is 6Mgel Confidence?
6Mgel
has been offering Guaranteed Return to all customers for 16
years. Any gel equipments can be returned for any reason without
rejection. 6Mgel quality shows a total of 2 unit being returned
and 4 units being repaired among all units sold.
How to
electrophoresis PCR products?
How to run
high-speed gel with no running buffer
Hot to
eliminate agarose gel band smiling?
How to
save agarose?
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Explore
the 6Mgel website --
You
will find techniques and tips that can help you produce data
more quickly and easily, with exceptional results.
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Liberty 120 high-
speed gel system
The most
recognized 6Mgel model
See Genotyping
/ PCR results in 6 minutes
Problem of old PCR gel electrophoresis:
The agarose gel formation is readily reversible by heat. Over
heating will melt the agarose gel. That is the reason why gel electrophoresis of
PCR samples in most labs were performed slowly at low voltage.
The breakthrough of high speed PCR gel electrophoresis
in 6 minutes:
By designs of reducing heat generation and cooling
enhancement, Biokeystone overcomes the problem of PCR gel melting in
electrophoresis. Higher power drives DNA samples run through PCR gel in just 6
minutes without over heating the agarose gel.
To know more PCR product of gel electrophoresis, please visit the website and email to
info@6mgel.com
for user manuals.
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